2010

• Amorim, M. C. P.; Simões, J. M.; Mendonça, N.; Bandarra, N. M.; Almada, V. C.; Fonseca, P. J., 2010. Lusitanian toadfish song reflects male quality. The Journal of Experimental Biology, 213: 2997-3004.
• Barrento, S.; Marques, A.; Teixeira, B.; Mendes, R.; Bandarra, N. M.; Vaz-Pires, P.; Nunes, M. L., 2010. Chemical composition, cholesterol, fatty acid and amino acid in two populations of brown crab Cancer pagurus: ecological and human health implications. Journal of Food Composition and Analysis, 23: 716–725.
• Barrento, S.; Marques, A.; Vaz-Pires, P.; Nunes, M. L., 2010. Physiological changes in the edible crab Cancer pagurus during live transport and recovery in stocking tanks. ICES Journal of Marine Science, 67 (3): 435-443.
• Batista, I.; Ramos, C.; Coutinho, J.; Bandarra, N. M.; Nunes, M. L., 2010. Characterization of protein hydrolysates and lipids obtained from black scabbardfish (Aphanopus carbo) by-products and antioxidative activity of the hydrolysates produced. Process Biochemistry, 45: 18–24. DOI information: 10.1016/j.procbio.2009.07.019.
• Bennouna, A.; Attar, J.; Abouabdellah, R.; Palma, S.; Penna, A.; Moita, M.T., 2010. First records of Ostreopsis cf.siamensis in Moroccan Atlantic upwelling waters. IOC­_UNESCO/Harmful Algae News, nº42.
• Boavida-Portugal, J.; Moreno, A.; Gordo, L.; Pereira, J., 2010. Environmentally adjusted reproductive strategies in females of the commercially exploited common squid Loligo vulgaris. Fisheries Research, 106: 193-198.
• Botelho, M.J.; Vale, C.; Mota, A.M.; Rodrigues, S.M.; Costa, P.R.; Simões Gonçalves, M.L.S., 2010. Matrix effect on paralytic shellfish toxins quantification and toxicity estimation in mussels exposed to Gymnodinium catenatum.Food Additives & Contaminants: Part A, 27: 12, 1724-1732.
• Botelho, M.J.; Vale, C.; Mota, A.M.; Simões Gonçalves, M.L.S., 2010. Depuration kinetics of paralytic shellfish toxins in Mytilus galloprovincialis exposed to Gymnodinium catenatum: laboratory and field experiments. J. Environ. Monit., 12, 2269–2275.
• Cabeçadas, G.; Brogueira, M.J.; Cavaco, M.H.; Gonçalves, C., 2010.Chemical Signature of Intermediate Water Masses along Western Portuguese Margin. J. Oceanography, 66:201-210.
• Cabrita, M.T.; Vale, C.; Rauter, A.P., 2010. Halogenated Compounds from Marine Algae. Marine Drugs, 8, 2310-2317.
• Canário, J.; Vale, C.; Poissant, L.; Nogueira, M.; Pilote, M.; Branco, V., 2010. Mercury in sediments and vegetation in a moderately contaminated salt marsh (Tagus Estuary, Portugal). Journal of Environmental Sciences, 22, 8, 1151-1157.
• Carbonell, A.; dos Santos, A.; Alemany, F.; Vélez-Belchi, P., 2010. Larvae of the red shrimp Aristeus antennatus(Decapoda: Dendrobranchiata: Aristeidae) in the Balearic Sea: new occurrences fifty years later. Marine Biodiversity Records 3(e103). doi: 10.1017/S17552672100007578.
• Cardoso, C.; Bandarra, N. M.; Lourenço, H.; Afonso, C.; Nunes, M. L., 2010. Methylmercury risks and EPA+DHA benefits associated with seafood consumption in Europe. Risk Analysis, 30 (5): 827-840.
• Cardoso, C.; Farias, I.; Costa, V.; Nunes, M. L.; Gordo, L., 2010. Estimation of risk assessment of some heavy metals intake through black scabbardfish (Aphanopus carbo) consumption in Portugal. Risk Analysis, 30(6): 952-961.
• Cardoso, C.; Mendes, R.; Pedro, S.; Vaz-Pires, P.; Nunes, M. L., 2010. Quality changes during storage of minced Fish products containing dietary fibre and fortified with 3 fatty acids. Food Science and Technology International, 16(1): 31-42.
• Cardoso, C.; Mendes, R.; Pedro, S.; Vaz-Pires, P.; Nunes, M. L., 2010. Effect of salt and MTGase on the production of high quality gels from farmed sea bass. Journal of Food Engineering, 101: 98–105.
• Cardoso, C.; Mendes, R.; Salvador, A.; Saraiva, J.; Vaz-Pires, P.; Nunes, M. L., 2010. Quality characteristics of high pressure-induced hake (Merluccius capensis) protein gels with and without MTGase. Journal of Aquatic Food Product Technology, 19(3 & 4): 193 – 213.
• Carvalho, S.; Barata, M.; Pereira, F.; Pousão-Ferreira, P.; Fonseca, L.C.; Gaspar, M.B., 2010. Can macrobenthic communities be used in the assessment of environmental quality of fish earthen ponds? Journal of the Marine Biological Association of the United Kingdom, 90(1): 135-144.
• Castelo Branco, M. A.; Arruda, M.; Gamito S., 2010. Feeding habits of Solea senegalensis in earthen ponds in Sado estuary, Journal of Sea Research, Volume 64, Issue 4, Proceedings of the Seventh International Symposium on Flatfish Ecology, Part II, P. 446-450.
• Cortés E.; Arocha F.; Beerkircher L.; Carvalho F.; Domingo A.; Heupel M.; Holtzhausen H.; Santos M.N.; Ribera M.; Simpfendorfer C., 2010. Ecological risk assessment of pelagic sharks caught in Atlantic pelagic longline fisheries. Aquatic Living Resources, 23 (1): 25-34.
• Costa, A.M., 2010. Weight-length relations for the Atlantic horse mackerel of the Portuguese coast. Cah. Biol. Mar., 51 (3): 319-325.
• Costa, P., Caeiro, S.; Diniz, M.; Lobo, J.; Martins, M.; Ferreira, A., Caetano, M., Vale, C.; DelValls, A.; Costa, M., 2010. A description of chloride cell and kidney tubule alterations in the flatfish Solea senegalensis exposed to moderately contaminated estuarine sediments. Journal of Sea Research, 64: 465–472.
• Costa, P.R.; Botelho, M.J.; Lefebvre, K.A., 2010. Characterization of paralytic shellfish toxins in seawater and sardines (Sardina pilchardus) during blooms of Gymnodinium catenatum. Hydrobiologia 655:89-97.
• Costa, P.R.; Pereira, J., 2010. Ontogenic differences in the concentration of domoic acid in the digestive gland of male and female Octopus vulgaris. Aquatic Ecology, 9: 221-225.
• Dâmaso-Rodrigues, M. L.;Pousão-Ferreira, P.; Ribeiro, L.;Coutinho, J.; Bandarra, N.M.; Gavaia, P.J.;Narciso, L.;Morais, S., 2010. Lack of essential fatty acids in live feed during larval and post-larval rearing: effect on the performance of juvenile Solea senegalensis. Aquaculture International, 18(5): 741-757.
• Diogo, P.; Soares, F.; Dinis, M. T.; Cabrita, E. 2010. Ovarian Fluid Influence on Solea senegalensis sperm motility. Second International Workshop on Biology of Fish Gametes. Journal of applied Ichthyology, 26 (5):690-695.
• Duarte, B.; Caetano, M.; Almeida, P.R.; Vale, C.; Caçador, I., 2010. Accumulation and biological cycling of heavy metal in four salt marsh species, from Tagus estuary (Portugal). Environmental Pollution 158:1661-1668.
• EFSA (BIOHAZ - Working Group on fish oil for human consumption: Sava Buncic, Charlotte Jacobsen, Maria Leonor Nunes, Jörg Oehlenschläger and Miguel Prieto Maradona) (2010). Scientific Opinion on Fish Oil for Human Consumption. Food Hygiene, including Rancidity. Panel on Biological Hazards. EFSA Journal 8(10):1874. [48 pp.] doi:10.2903/j.efsa.2010.1874.
• Elhasni, K.; Ghorbel, M.; Vasconcelos, P.; Jarboui, O., 2010. Reproductive cycle and size at first sexual maturity of Hexaplex trunculus (Gastropoda: Muricidae) in the Gulf of Gabès (southern Tunisia). Invertebrate Reproduction & Development, 54 (4): 213-225.
• Escalera, L.; Reguera, B.; Moita, M.T.; Pazos, Y.; Cerejo, M.; Cabanas, J.M.; Ruiz-Villarreal, M., 2010. Bloom dynamics of Dinophysis acuta in an upwelling system: In situ growth versus transport. Harmful Algae, 9: 312-322
• Felberg, H. S.; Hagen, L.; Slupphaug, G.; Batista, I.; Nunes, M. L.; Olsen, R. L.; Martinez, I., 2010. Partial characterization of gelatinolytic activities in herring (Clupea harengus) and sardine (Sardina pilchardus) possibly involved in post-mortem autolysis of ventral muscle. Food Chemistry, 119, 675-683.
• Fernández, C.; Cerviño, S.; Pérez, N.; Jardim, E., 2010. Stock assessment and projections incorporating discard estimates in some years: an application to the hake stock in ICES Divisions VIIIc and IXa. ICES J. Mar. Sci. 67(6): 1185-1197.
• Ferreira M.; Caetano M.; Antunes P.; Costa J.; Gil O.; Bandarra N.; Pousão-Ferreira P.; Vale P.; Reis-Henriques M.A. 2010. Assessment of contaminants and biomarkers of exposure in wild and farmed seabass. Ecotoxicology and Environmental Safety, 73, 579-588.
• Fradique, M.; Batista, A. P., Nunes, M. C., Gouveia, L., Bandarra, N.M., Raymundo, A., 2010. Chlorella vulgarisand Spirulina maxima biomass incorporation in pasta products. Journal of the Science of Food and Agriculture, 90: 1656-1664.
• Frias, J.P.G.L.; Sobral, P.; Ferreira, A.M., 2010. Organic pollutants in microplastics from two beaches of the portuguese coast. Marine Pollution Bulletin, 60, 1988-1992.
• Gago, J.; Martins, T.; Luís,O. J.; Pousão-Ferreira, P. 2010. Survival and growth of selected marine fish larvae first fed with eggs and endotrophic larvae of the sea urchin Paracentrotus lividus. Aquaculture Research41(9):96-108.
• Galley, T. H.; Batista, F. M.; Braithwaite, R.; King, J.; Beaumont, A.R., 2010. Optimisation of larval culture of the mussel Mytilus edulis (L). Aquaculture International, 18: 315-325.
• Ganias, K.; Rakka, M; Vavalidis, T.; Nunes, C., 2010. Measuring batch fecundity using automated particle counting. Fisheries Research 106: 570–574
• Gonçalves, C.; Brogueira, M.J.; Camões, M.F., 2010. Seasonal and tidal influence on the variability of nitrous oxide in the Tagus estuary, Portugal. Scientia Marina 74S1; doi:10.3989/scimar.2010.74s1057.
• Gouveia, L.; Sousa, J., Moura, P., Bandarra, N. M., 2010. Microalgae- source of natural bioactives as functional ingredients. Food Science and Technology Bulletin: Functional Foods, 7 (2) 21–37 DOI: 10.1616/1476-2137.15884.
• Griffiths, A. M.; Sims, D. W.; Cotterell, S.; El Nagar, A.; Ellis, J. R.; Lynghammar, A.; McHugh, M.; Neat, F. C.; Pade, N.; Queiróz, N.; SERRA-PEREIRA, B.; Rapp, T.; Wearmouth, V. J.; Genner, M. J.. 2010. Molecular markers reveal spatially segregated cryptic species in a critically endangered fish, the common skate (Dipturus batis).Proceedings of the Royal Society B: Biological Sciences 277: 1497-1503.
• Guerra, A.; Allcock, L.; Pereira, J., 2010.Cephalopod life history, ecology and fisheries: an introduction. Fisheries Research, 106: 117-124.
• Guerreiro, I.; Vareilles, M.; Pousão-Ferreira, P.; Rodrigues, V.; Dinis, M.T.; Ribeiro, L., 2010. Effect of age-at-weaning on digestive capacity of white seabream (Diplodus sargus). Aquaculture, 300: 194-205.
• Jardim, E.; Cerviño, S.; Azevedo, M., 2010. Evaluating management strategies to implement the recovery plan for Iberian hake (Merluccius merluccius); the impact of censored catch information. ICES J. Mar. Sci. 67(2): 258-269.
• Jayed, M.; Chafik, A.; Benbrahim, S.; Vale, C.; Bakkas, S.; Pereira, P., Ferreira, A.M., 2010. polychkorinated biphenyls in the mussel Mytillus galloprovincialis sampled along Moroccan Atlantic coast, 2010. Journal of Oceanography and Marine Science, 15, 93-98.
• Joaquim, S.; Pereira, J. C.; Leitão, A.; Matias, D.; Chaves, R.; Guedes-Pinto, H.; Gaspar, M. B., 2010. Genetic diversity of two Portuguese populations of the pullet carpet shell Venerupis senegalensis, based on RAPD markers: contribution to a sustainable restocking program. Helgoland Marine Research. 64 (4): 289–295. DOI 10.1007/s10152-009-0182-7.
• Jouffre, D.; Borges, M. F.; Bundy, A.; Coll, M.; Diallo, I.; Fulton, E. A.; Guitton, J.; Labrosse, P.; Mohamed Abdellahi, K. o.; Masumbuko, B.; Thiao D., 2010. Estimating EAF indicators from scientific trawl surveys: theoretical and practical concerns. ICES J. Mar. Sci., 67:796-806.
• Larsen, R.; Mierke-Klemeyer, S.; Maehre, H.; Elvevoll, E. O.; Bandarra, N. M.; Cordeiro, A. R.; Nunes, M. L.; Schram, E.; Luten, J.; Oehlenschläger, J., 2010. Retention of health beneficial components during hot and cold-smoking of African Catfish (Clarias gariepinus) fillets. Journal of Food Safety and Food Quality, 61: 31-35.
• Leitão, A.; Carvalho, S.; Ben-Hamadou, R.; Gaspar, M.B., 2010. Cytogenetics of Hediste diversicolor (Annelida: Polychaeta) and comparative karyological analysis within Nereididae. Aquatic Biology, 10 (2): 193-200.
• Link, J. S.; Yemane, D.; Shannon, L. J.; Coll, M.; Shin, Y-J.; Hill, L.; Borges, M.F., 2010. Relating marine ecosystem indicators to fishing and environmental drivers: an elucidation of contrasting responses. ICES J. Mar. Sci. 67: 787-795.
• Lobo, J.; Costa, P.; Caeiro, S.; Martins, M.; Ferreira, A.; Caetano, M.; Cesário, R.; Vale C.; Costa, M., 2010.Evaluation of the potential of the common cockle (Cerastoderma edule L.) for the ecological risk assessment of estuarine sediments: bioaccumulation and biomarkers. Ecotoxicology 19:1496-1512.
• Makridis, P.; Ribeiro, L.; Dinis, M.T., 2010. "Influence of Microalgae Supernatant, and Bacteria Isolated from Microalgae Cultures, on Microbiology, and Digestive Capacity of Gilthead Seabream (Sparus aurata) and Senegalese Sole (Solea senegalensis) Larvae". Journal of the World Aquaculture Society, 41(5):780–790.
• Marçalo, A.; Marques, T.; Araujo, J.; Pousão-Fereira, P.; Erzini, K.; Stratoudakis, Y., 2010. Fishing simulation experiments for predicting the effect of purse-seine capture on sardine (Sardina pilchardus). ICES Journal of Marine Science 67: 334-344
• Marques, A.; Lourenço, H.; Maulvault, A. L.; Amaral, A.; Roseiro, C.; Santos, C.; Langerhold, T.; Cencic, A.; Rainieri, S.; Barranco, A., 2010. Safety first. International Innovation Food. Issue May: 16-18.
• Marques, A.; Nunes, M. L.; Moore, S.; Strom, M., 2010. Climate change and seafood safety: human health implications. Food Research International. 43 (7): 1766-1779.
• Marques, A.; Teixeira, B.; Barrento, S.; Anacleto, P.; Carvalho, M. L.; Nunes, M. L., 2010. Chemical composition of spider crab Maja brachydactyla: human health implications. Journal of Food Composition and Analysis, 23: 230-237.
• Matos, E.; Gonçalves, A.; Nunes, M. L.; Dinis, M. T.; Dias, J., 2010. Effect of harvesting stress and slaughter conditions on selected flesh quality criteria of gilthead seabream (Sparus aurata). Aquaculture, 305: 66-72.
• Mendes, R., 2010. Os novos desafios das tecnologias de conservação e transformação dos produtos da pesca e aquicultura. In: O Sector Marítimo Português, C. Guedes Soares e C. Monteiro (Eds.), Salamandra, Lisboa, 2010, (ISBN 978-972-972-689-237-3), pp. 129-140.
• Moita, M.T.; Silva, A.; Palma, S.; Vilarinho, M.G., 2010. The coccolithophore summer-autumn assemblage in the upwelling waters of Portugal: Patterns of mesoscale distribution (1985 – 2005), Estuarine, Coastal and Shelf Science, 87: 411–419.
• Oliveira, C.; Duncan, N.J.; Pousão-Ferreira, P.; Mañanós, E.; Sánchez-Vázquez, F.J., 2010. Influence of the lunar cycle on plasma melatonin, vitellogenin and sex steroids rhythms in Senegal sole, Solea senegalensis.Aquaculture 306 (1-4): 343-347.
• Oliveira, M.M.; Camanho, A.S.; Gaspar, M.B., 2010. Technical and economic efficiency analysis of the Portuguese artisanal dredge fleet. ICES Journal of Marine Science, 67: 1811–1821.
• Ortiz, M.; Mejuto, J.; Paul, S.; Yokawa, K.; Santos, M.N., 2010. An updated biomass index of abundance for north Atlantic swordfish 1963-2008. Col. Vol. Sci. Pap., ICCAT, Madrid, 65(1): 171-184.
• Otero, P.; Pérez, S.; Alfonso, A.; Vale, C.; Rodríguez, P.; Gouveia, N.N.; Gouveia, N.; Delgado, J.; Vale, P.; Hirama, M.; Ishihara, Y.; Molgó, J.; Botana, L.M., 2010. First toxin profile of ciguateric fish in Madeira Arquipelago (Europe). Analytical Chemistry, 82 (14), 6032–6039.
• Palma, A.S.; Mouriño, H.; Silva, A.;. Barão, M.I.; Moita, M.T., 2010.Can Pseudo-nitzschia blooms be modeled by coastal upwelling in Lisbon Bay? Harmful Algae, 9: 294–303.
• Pereira, P.; de Pablo, H.; Carvalho, S.; Vale, C.; Pacheco, M., 2010. Daily availability of nutrients and metals in a eutrophic meso-tidal coastal lagoon (Óbidos lagoon, Portugal). Marine Pollution Bulletin 60, 1868-1872.
• Pereira, P.; de Pablo, H.; Carvalho, S.; Vale, C.; Pacheco, M., 2010. Daily availability of nutrients and metals in a eutrophic meso-tidal coastal lagoon (Óbidos lagoon, Portugal). Marine Pollution Bulletin, 60, 10, 1868-1872.
• Picot, L.; Ravallec R.; Fouchereau-Peron, M.; Vandanjon, L.; Jaouen, P.; Chaplain-Derouiniot, M.; Guerard, F.; Chabeaud, A.; Le Gal, Y.; Alvarez, O. M.; Berge, J.-P.; Piot, J.-M.; Batista, I.; Pires, C.; Thorkelsson, G.; Delannoy, C.; Jakobsen, G.; Johansson, I.; Bourseau, P., 2010. Impact of ultrafiltration and nanofiltration of an industrial fish protein hydrolysate on its bioactive properties. J Sci Food Agric, 90: 1819–1826.
• Pinto, W.; Figueira, L.; Laura Ribeiro, L.; Yúfera, M.; Dinis, M.T.; Aragão, 2010. Dietary taurine supplementation enhances metamorphosis and growth potential of Solea senegalensis larvae. Aquaculture, 309(1-4): 159-164.
• Pitcher, G.C.; Figueiras, F.G.; Hickey, B.M.; Moita, M.T., 2010. The physical oceanography of upwelling systems and the development of harmful algal blooms. Progress in Oceanography 85: 5–32.
• Raimundo, J.; Costa, P.M.; Vale, C.; Costa, M.H.; Moura, I., 2010. DNA damage and metal accumulation in four tissues of feral Octopus vulgaris. Ecotoxicology and Environmental Safety 73, 1543–1547.
• Raimundo, J.; Costa, P.M.; Vale, C.; Costa, M.H.; Moura, I., 2010. Metallothioneins and trace elements in digestive gland, gills, kidney and gonads of Octopus vulgaris. Comparative Biochemistry and Physiology, Part C., 152, 139-146.
• Raimundo, J.; Vale, C.; Canário, J.; Branco, V.; Moura, I., 2010. Relations between mercury, methyl-mercury and selenium in tissues of Octopus vulgaris from the Portuguese Coast. Environmental Pollution 158, 2094-2100.
• Raimundo, J.; Vale, C.; Duarte, R.; Moura, I., 2010. Association of Zn, Cu, Cd and Pb with protein fractions and sub-cellular partitioning in the digestive gland of Octopus vulgaris living in habitats with different metal levels.Chemosphere, 81, 1314-1319.
• Ramel, A.; Martinéz, J. A.; Kiely, M.; Bandarra, N. M.; Thorsdottir, I., 2010. Effects of weight loss and seafood consumption on inflammation parameters in young, overweight and obese European men and women during 8 weeks of energy restriction. European Journal of Clinical Nutrition (2010), 1–7.
• Ramel, A.; Martinéz, J. A.; Kiely, M.; Morais, G.; Bandarra, N. M.; Thorsdottir, I., 2010. Moderate consumption of fatty fish reduces diastolic blood pressure in overweight and obese European young adults during energy restriction. Nutrition, 26:168-174.
• Riba, I.; Kalman, J.; Vale, C.; Blasco, J., 2010. Influence of sediment acidification on the bioaccumulation of metals in Ruditapes philippinarum. Environm. Sci. Pollut. Res. DOI 10.1007/s11356-010-0338-7.
• Ribeiro, A.R.A.; Ribeiro, L.; Sæle, Ø.; Hamre, K.; Dinis, M.T.; Moren M., 2010. Iodine enriched rotifers and Artemia prevents goitre in Senegalese sole (Solea senegalensis) larvae reared in a recirculation system.Aquaculture Nutrition, 17(3): 248–257
• Rodrigues, S.M., Vale, P.; Chaveca, T.; Laires, A.; Rueff, J.; Oliveira, N.G., 2010. Naturally contaminated shellfish samples: Quantification of diarrhetic shellfish poisoning toxins in unhydrolysed and hydrolysed extracts and cytotoxicity assessment. Journal of Applied Toxicology, 30, 699-707.
• Rosa, R., Gonzalez, L.; Broitman, B.R.; Garrido, S.; Santos, A.M.P.; Nunes, M.L., 2010. Bioenergetics of small pelagics in upwelling systems: relationship between fish condition, coastal ecosystem dynamics and fisheries.Marine Ecology Progress Series, 410: 205-210 doi: 10.3354/meps08635.
• Rosa, R.; Andrade, A. M.; Bandarra, N. M.; Nunes, M. L., 2010. Physiological and biochemical effects of conjugated linoleic acid and its use in aquaculture. Reviews in Aquaculture, 2(2): 59–72.
• Rufino, M.M.; Gaspar, M.B.; Pereira, A.M.; Maynou, F.; Monteiro, C.C., 2010. Ecology of megabenthic bivalve communities from sandy beaches on the south coast of Portugal. Scientia Marina, 74 (1): 163-178.
• Saavedra, M., Nicolau, L.; Pousão-Ferreira, P., 2010. Development of deformities at the vertebral column in Diplodus sargus (L., 1758) early larval stages (p). Aquaculture Research, 41(7):1054-1063.
• Saavedra,M.; Conceição, L.E.C.; Barr, Y.; Helland, S.; Pousão-Ferreira, P.; Yúfera, M.; Dinis, M.T., 2010.Tyrosine and phenylalanine supplementation on Diplodus sargus larvae: effect on growth and quality.Aquaculture Research, 41(10):1523-1532.
• Santos, M., Sole, M.; Lima, D.; Hambach, B.; Ferreira, A.M.; Reis-Henriques, M.A., 2010. Validating a multi-biomarker approach with the shanny Lipophrys pholis to monitor oil spills in European marine ecosystems,Chemosphere, 81, 685-691.
• Santos, M.N.; Lino, P.G., 2010. Aspects of the fishery, maturation and net selectivity of the wedge sole (Dicologoglossa cuneata, Moreau 1881) off southern Portugal: implications for fishery management. Journal of the Marine Biological Association of the UK, 90 (7): 1465-1474.
• Santos-Echeandía, J.; Vale, C.; Caetano, M.; Pereira, P.; Prego, R., 2010. Effect of tidal flooding on metal distribution in pore waters of marsh sediments and its transport to water column (Tagus estuary, Portugal).Marine Environmental Research, 70, 358-367.
• Serra-Pereira, B.; Farias, I.; Moura, T.; Gordo, L.S.; Santos, M.N.; Figueiredo, I., 2010. Morphometric relationships for Rajidae species of the Portuguese continental shelf. ICES Journal of Marine Science, 67 (8): 1596-1603.
• Shin, Y-J.; Shannon, L. J.; Bundy, A.; Coll, M.; Aydin, K.; Bez, N.; Blanchard, J. L.; Borges, M. F.; Cotter, A. J. R.; Cury, P. M.; Diallo, I.; Diaz, E.; Heymans, J. J.; Hill, L.; Johannesen, E.; Jouffre, D.; Kifani, S.; Labrosse, P.; Link, J. S.; Mackinson, S.; Masski, H.; Möllmann, C.; Neira, S.; Ojaveer, H.; Mohammed Abdallahi, K. o.; Perry, I.; Thiao, D.; Yemane, D., 2010. Using indicators for evaluating, comparing and communicating the ecological status of exploited marine ecosystems. 2. Setting the scene. ICES J. Mar. Sci. 67:692-716.
• Solari, A.P.; Santamaría, M.T.G.; Borges, M.F.; Santos, A.M.P.; Mendes, H.; Balguerías, E.; Díaz Cordero, J.A.; Castro, J.J.; Bas, C., 2010. On the dynamics of Sardina pilchardus: orbits of stability and environmental forcing.ICES Journal of Marine Science, 67(8): 1565-1573.
• Vale, P., 2010. Metabolites of saxitoxin analogues in bivalves contaminated by Gymnodinium catenatum. Toxicon, 55 (1), 162-165.
• Vale, P., 2010. Profiles of fatty acids and 7-O-acyl okadaic acid esters in bivalves: Can bacteria be involved in acyl esterification of okadaic acid? Comparative Biochemistry and Physiology, Part C, 151, 18–24.
• Vale, P., 2010. Saxitoxin analogues: developments in toxin chemistry, detection and biotransformation during the 2000’s. Phytochemistry reviews, 9 (4), 525-535.
• Vasconcelos, P.; Gaspar, M.B.; Barroso, C.M., 2010. Imposex in Bolinus brandaris from the Ria Formosa lagoon (southern Portugal): usefulness of “single-site baselines” for environmental monitoring. Journal of Environmental Monitoring, 12 (10): 1823-1832.
• Zwolinski, J.P.; Oliveira, P.B.; Quintino, V.; Stratoudakis, Y., 2010. Sardine potential habitat and environmental forcing off western Portugal. ICES Journal of Marine Science,67 (8): 1553-1564.

2009

• Barrento, S.; Marques, A.; Teixeira, B.; Carvalho, M.L.; Vaz-Pires, P.; Nunes, M.L. 2009. Contaminants in two populations of edible crab Cancer pagurus: environmental and human health implications. Food and Chemical Toxicology. 47: 150-156.
• Barrento, S.; Marques, A.; Teixeira, B.; Anacleto, P.; Vaz-Pires, P.; Carvalho, M.L.; Nunes, M.L. In press. Macro and trace elements in two populations of brown crab Cancer pagurus: ecological and human health implications. Journal of Food Composition and Analysis. DOI: 10.1016/j.jfca.2008.07.010
• Batista, F. M., Boudry, P., Dos Santos, A., Renault, T., Ruano F. 2009. Infestation of the cupped oystersCrassostrea angulata, C. gigas and their first generation hybrids by the copepod Myicola ostreae: differences in susceptibility and host response. Parasitology 136: 537–543
• Bourseau, P.; Vandanjon, L.; Jaouen, P.; Chaplain-Derouiniot, M.; Massé, A.; Guérard, F.; Chabeaud, A.; Fouchereau-Péron, M.; Le Gal, Y.; Ravallec-Plé, R.; Bergé, J.-P.; Picot, L.; Piot, J.-M.; Batista, I.; Thorkelsson, G.; Delannoy, C.; Jakobsen, G.; Johansson, I., 2009. Fractionation of fish protein hydrolysates by ultrafiltration and nanofiltration: impact on peptidic populations. Desalination, 244: 303-320.
• Caçador, I.; Caetano, M.; Duarte, B.; Vale, C., 2009. Stock and losses of trace elements from salt marsh plants. Marine Environmental Research 67: 75-82.
• Canário, J.; Poissant, L.; O’Driscoll, N.; Vale, C.; Pilote, M.; Lean, D. Sediment processes and mercury transport in a frozen freshwater fluvial lake (Lake St. Louis, Qc, Canada). Environ. Pollution. doi: 10.1016/j.envpol.2008.11.042.
• Cardoso, C., Mendes, R.; Pedro, S.; Vaz-Pires, P.; Nunes, M.L., 2009. Quality changes during storage of minced fish products containing dietary fibre and fortified with w3 fatty acids. Food Science and Technology International. (Aceite para publicação, Janeiro 2009). 
• Carvalho, S.; Falcão, M.; Cúrdia, J., Moura, A.; Serpa, D., Gaspar, M.B., Dinis, M.T.; Pousão-Ferreira, P., Cancela da Fonseca, L., 2009. Benthic dynamics within a land-based semi-intensive aquaculture fish farm: the importance of settlement ponds. Aquaculture international, in press, DOI 10.1007/s10499-008-9227-1.
• Chatterjee, M.; Canário, J.; Sarkar, S.; Branco, V.; Bhattacharya, A.K.; Bhattacharya, B.; Saha, S., 2009. Mercury enrichments in core sediments in Sunderban mangroves, Northeastern part of the Bay of Bengal and their ecotoxicological significance. Environ. Geology. (doi: 10.1007/s00254-008-1404-z).
• Hampel, M.; Canário, J.; Branco, V.; Vale, C.; Blasco, J., 2009. Environmental levels of Linear Alkylbenzene Sulfonates (LAS) in sediments from the Tagus estuary, Portugal. Environ. Monit. Assessment., 149, 151-161. 
• Hastie, L.C.; Nyegaard, M.; Collins, M.A.; Moreno, A.; Pereira, J.M.F.; Piatkowski, U.; Pierce, G.J., (in press). Reproductive biology of the loliginid squid, Alloteuthis subulata, in the north-east Atlantic and adjacent waters. Aquatic Living Resources, 22: xx-xx.
• Hastie, L.C.; Pierce, G.J.; Wang, J.; Bruno, I.; Moreno, A.; Piatkowski, U.; Robin J-P. (in press). Cephalopods in the north-east Atlantic: species, biogeography, ecology, exploitation and conservation. Oceanography & Marine Biology: An Annual Review, 47: xx-xx.
• Leitão, A.; Vasconcelos, P.;  Ben-Hamadou, R.; Gaspar, M.B.; Barroso, C.M.; Ruano, F., 2009. Cytogenetics of Bolinus brandaris and phylogenetic inferences within Muricidae (Molusca gateropoda). Biological Journal of the Linnean Society, 96 (1), 185-193.
• Lino, P. G.; Bentes, L.; Abecasis, D.; Santos, M.N.; Erzini, K. Comparative behaviour of wild and 
• Lourenço, H. M.; Anacleto, P.; Afonso, C.; Ferraria, V.; Martins, M. F.; Carvalho, M. L.; Lino, A. R.; Nunes, M. L., 2009. Elemental composition of cephalopods from Portuguese continental waters. Food Chemistry, 113:1146-1153. (URL http://dx.doi.org/doi:10.1016/j.foodchem.2008.09.003 )
• Matias, D.; Joaquim, S.; Leitão, A.; Massapina, C., 2009. Effect of geographic origin, season of the year and conditioning temperature on broodstocks conditioning, spawning success and larval viability of Ruditapes decussatus (Linné, 1758). Aquaculture International. (in press) DOI: 10.1007/s10499-008-9197-3
• Mendes, R.; Cardoso, C.; Pestana, C., 2009. Measurement of malondialdehyde in fish: a comparison study between HPLC methods and the traditional spectrophotometric test. Food Chemistry, 112: 1038-1045.
• Mil-Homens, M.; Branco, V.; Lopes, C.; Vale, C.; Abrantes, F.; Boer, W.; Lebreiro, S.; Maria, V., 2009. Using Factor Analysis to characterise historical trends of trace metal contamination in a sediment core from the Tagus Prodelta, Portugal. Water, Air and Soil Pollution, 197:277-287
• Moreno, A.; dos Santos, A.; Piatkowski, U.; Santos, A.M.P.; Cabral, H., 2009. Distribution of cephalopod paralarvae in relation to the regional oceanography of the western Iberia. Journal of Plankton Research 31(1):73-91, dói:10.1093/plankt/fbn103.
• Moura,, O.; Fernandes, A. C., 2009. Kriging density estimates for the bluemouth rockfish, Helicolenus dactylopterus (Scorpaenidae) off the southern Portuguese coast. Fish.Res. 95, p 112-124
• Oliveira, M.M.; Gaspar, M.B.; Paixão, J.M.P.; Camanho, A.S., 2009. Productivity change of the artisanal fishing fleet in Portugal: a Malmquist index analysis. Fisheries Research, 95 (2-3): 189-197.
• Ozorio, R.; Valente, L.M.P.; Correia, S.; Pousão-Ferreira, P., Damasceno-Oliveira, A., Escórcio, C., Oliva-Teles, A., 2009.  Protein requirement for maintenance and maximum growth of two banded seabream (Diplodus vulgaris) juveniles. Aquaculture Nutrition, 15: 85-93.
• Pereira, P.; de Pablo, H.; Vale, C.; Nogueira, M.; Franco, V., 2009. Spatial and seasonal variation of water quality in an impacted coastal lagoon (Óbidos lagoon, Portugal). Environmental Monitoring and Assessment (in press) (doi: 10.1007/s10661-008-0355-x)
• Pereira, P.; de Pablo, H.; Vale, C.; Rosa-Santos, F.; Cesário, R., 2009. Metal and nutrient dynamics in a eutrophic coastal lagoon (Óbidos, Portugal): the importance of observations at different time scales. Environmental Monitoring and Assessment (doi: 10.1007/s10661-008-0593-y)
• Pereira, P.; Raimundo, J., Vale, C., Kadar, E., 2009. Metal concentrations in digestive gland and mantle of Sepia officinalis from two coastal lagoons of Portugal. Science of the Total Environment, 407(3), 1080-1088 (doi:10.1016/j.scitotenv.2008.10.023).
• Pinto, A.L.; Fernandes, M.; Pinto, C.; Albano, H.; Castilho, F.; Teixeira, P. And Gibbs, P.A., 2009 - Characterization of anti-Listeria bacteriocins isolated from shellfish: potencial antimicrobials to control non-fermented seafood. International Journal of Food Microbiology. 129 (1):50-58.
• Pires, C.; Batista, I.; Fradinho, P.; Costa, S., 2009. Utilization of alkaline-recovered proteins from Cape hake by-products in the preparation of Frankfurter-type fish sausages. Journal of Aquatic Food Product Technology. Available online at http://jafpt.haworthpress.com
• Rosa, R.; Pereira, J.; Moreno, A.; Nunes, M.L., 2009. Bathymetric range, density and reproductive biology of the deep-sea cirrate octopus Opisthoteuthis calypso in the Portuguese continental slope. Journal of the Marine Biological Association of the United Kingdom, doi:10.1017/S0025315408002531.
• Silva, A.; Palma, S.; Oliveira, P. B.; Moita, M. T., 2009. Calcidiscus quadriperforatus and Calcidiscus leptoporus as oceanographic tracers in Lisbon bay (Portugal). Estuarine Coastal and Shelf Science, 81: 333-344
• Sykes, A.; Oliveira, A.; Domingues, P.; Cardoso, C.; Andrade, J.; Nunes, M.L. 2009. Assessment of European cuttlefish (Sepia officinalis, L.) nutritional value and freshness under ice storage using a developed Quality Index Method (QIM) and biochemical methods. Food Science and Technology, 42 (1):424-432. http://dx.doi.org/doi:10.1016/j.lwt.2008.05.010

2008

2007

• Afonso, C; Lourenço, H. M.; Abreu Dias, M.; Nunes, M. L.; Castro, M., 2007. Contaminant metals in black scabbard fish (Aphanopus carbo) caught off Madeira and the Azores. Food Chemistry 101: 120-125.
• Afonso-Dias, I.; Amorim, P.; Silva, A., 2007. Problems with assigning the ovaries of sardine (Sardina pilchardus) to the appropriate macroscopic maturity stage. JMBA - Biodiversity Records 5190
• Antunes, P.; Amado, J.; Vale C.; Gil, O., 2007. Influence of the chemical structure on mobility of PCB congeners in female and male sardine (Sardina pilchardus) from Portuguese coast. Chemosphere, 69: 395-402.
• Antunes, P.; Gil O.; Reis-Henriques M.A., 2007. Evidence of higher biomagnification factors for lower chlorinated PCBs in cultivated seabass. 2007. Science of the Total Environment, 377: 36-44
• Antunes, P.; Gil, O.; Ferreira, M.; Vale, C.; Reis-Henriques, M.A., 2007. Depuration of PCBs and DDTs in mullet under captivity clean conditions. Chemosphere, 67: S58-S64.
• Artigas, M.L.; Vale, P.; Gomes, S.S.; Botelho, M.J.; Rodrigues, S.M.; Amorim, A., 2007. Profiles of PSP toxins in shellfish from Portugal explained by carbamoylase activity. J. Chromatogr. A., 1160 (1-2), 99-105.
• Bandarra, N. M.; Monteiro, M.; Martínez, J. A.; Kiely, M.; Thorsdottir, I., 2007. Erythrocyte membrane fatty acid incorporation as a marker of fish diet in young overweight Europeans. J Aquatic Food Product Technology, 16(24): 3-11.
• Batista, F. M.; Arzul, I.; Pepin, J. F.; Ruano, F.; Friedman, C. S.; Boudry, P.; Renault, T., 2007. Detection of ostreid herpesvirus 1 DNA by PCR in bivalve molluscs: A critical review. Journal of Virological Methods 139 (2007) 1–11.
• Batista, F.M.; Leitão, A.; Fonseca, V.G.; Ben-Hamadou, R.; Ruano, F.; Henriques, M.A.; Guedes Pinto, H.; Boudry, P., 2007. Individual relationship between aneuploidy of gill cells and growth rate in the cupped oysters Crassostrea angulata, C. gigas and their reciprocal hybrids. Journal of Experimental Marine Biology and Ecology, 352: 226-233.
• Batista, I., 2007. By-catch, underutilized species and underutilized fish parts as food ingredients. Ed. F. Shahidi. In Maximising the value of marine by-products. Woodhead Publishing Limited, Cambridge, 171-198.
• Batista, I.; Pires, C.; Nelhas, R., 2007. Sardine protein recovery by acid and alkaline solubilisation. Food Science and Technology International, 13 (3): 189 – 194.
• Bebianno, M.J.; Lopes, B.; Guerra, L.; Hoarau, P.; Ferreira, A.M., 2007. Glutathione S-transferases and cytochrome P450 activities in Mytilus galloprovinvialis from the South coast of Portugal: effect of abiotic factors. Environment International, 33, 550-558.
• Bebianno, M.J.; Santos, C., Canário, J.; Gouveia, N.; Sena-Carvalho, D.; Vale C., 2007. Mercury and metallothionein-like proteins in the black scabbard fish Aphanopus carbo. Food and Chemical Toxicology, 45, 8, 1443-1452.
• Bernal, M.; Stratoudakis, Y.; Coombs, S.; Angélico, MM.; Lago de Lanzós, A.; Porteiro, C., Sagarminaga, Y.; Santos, M.; Uriarte, A.; Cunha, E.; Valdés, L.; Borchers, D., 2007. Sardine spawning in European Atlantic coast: spawning areas and temporal variability. Prog. Oceanogr. 74 210-227
• Bode, A.; Alvarez-Ossorio, M.T.; Cunha, M.E.; Garrido, S.; Varela, M.; Peleteiro, B.; Porteiro, C.; Valdés, L., 2007. Stable isotope studies of the pelagic food web on the northern and northwestern shelf of the Iberian Península. Progress in Oceanography, 74(2-3): 115-131
• Bordalo-Machado, P.; Figueiredo, I., 2007. Extraction and classification of longline fishing trips from vessel monitoring systems data with sequential recording gaps. Proceedings from the 5th International Symposium on Spatial Data Quality, 13-15 June, 2007, ITC Enschede, Netherlands. The International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences, Vol. 34, Part XXX, 7 pp.
• Branco, V.; Vale C.; Canário, J.; Santos, M.N., 2007. Mercury and Selenium in blue shark (Prionace glauca, Linnaeus 1758) and swordfish (Xiphias gladius, Linnaeus 1758) from two areas of the Atlantic Ocean. Environmental Pollution, 150 (3): 373-380. 
• Brogueira, M.J.; Oliveira, M.R.; Cabeçadas, G., 2007. Phytoplankton community structure defined by key environmental variables in Tagus estuary, Portugal. Mar. Env. Res., 64:616-628. (http://dx.doi.org/10.1016/j.marenvres.2007.06.007)
• Caçador I.; Costa A.L.; Vale C., 2007. Nitrogen sequestration capacity of two salt marshes from the Tagus estuary. Hydrobiologia 587: 137-145.
• Caetano, M.; Fonseca, N.; Cesário, R.; Vale, C., 2007. Mobility of Pb in salt marshes recorded by total content and stable isotopic signature. Science Total Environment 380:84-92.
• Caetano, M.; Madureira, M-J.; Vale, C., 2007. Exchange of Cu and Cd across the sediment-water interface of Ria Formosa sediments (Portugal). Hydrobiologia 587(1):147-155.
• Campos, A., Fonseca, P., 2007. Reduction of unwanted by-catch in the Portuguese crustacean trawl fishery through the use of square mesh windows. J. Fish. Aquat. Sci. 2, 17-26.
• Campos, A.; Fonseca, P.; Fonseca, T.; Parente, J., 2007. Definition of fleet components in the Portuguese bottom trawl fishery. Fish. Res. 83: 185-191.
• Canário, J.; Branco, V.; Vale, C., 2007. Seasonal Variation of Monomethylmercury Concentrations in Surface Sediments the Tagus Estuary (Portugal). Environmental Pollution, 148: 380-383.
• Canário, J.; Caetano, M.; Vale, C.; Cesário, R., 2007. Evidence for elevated production of methylmercury in salt marshes. Environ. Sci. Technol., 41, 21, 7376-7382. 
• Canário, J.; Prego, R.; Vale, C.; Branco, V., 2007. Distribution of Mercury and Monomethylmercury in Sediments of Vigo Ria, NW Iberian Peninsula. Water, Air and Soil Pollution, 182: 21-29.
• Cardoso, C.; Mendes, R.; Nunes, M. L., 2007. Dietary fibres' effect on the textural properties of fish heat-induced gels. J. Aquatic Food Product Technology, 16(3): 19-30.
• Cardoso, C.; Mendes, R.; Nunes, M. L., 2007. Effect of transglutaminase and carrageenan on restructured fish products containing dietary fibres. International Journal of Food Science and Technology, 42(11): 1257-1264.
• Carvalho, S.; Barata, M.; Gaspar, M.B.; Pousão-Ferreira, P.; Cancela da Fonseca, L., 2007. Enrichment of aquaculture earthen ponds with Hediste diversicolor: consequences for benthic dynamics and natural productivity. Aquaculture, 262: 227-236.
• Carvalho, S.; Cúrdia, J.; Moura, A.; Gaspar, M.B.; Dinis, M.T.; Pousão-Ferreira, P.; Cancela da Fonseca, L., 2007. The influence of white seabream (Diplodus sargus) production on macrobenthic colonization patterns. Acta Oecologica, 31: 307-315.
• Casado-Martínez, M.C.; Branco, V.; Vale, C.; Ferreira, A.M.; DelValls, T.A., 2007. Is Arenicola marina a suitable test organism to evaluate the bioaccumulation potential of Hg, PAHs and PCBs from dredged sediments? Chemosphere (2007), doi 10.1016 / j.chemosphere. 2007.08.040.
• Cavaco, H.; Pissarra, J., 2007. Distribution of nutrients and AOU in the Mediterranean Water (North Atlantic Ocean). Chemistry and Ecology 23 (4):315–323 .
• DelValls T.A.; Chapman P.M.; Drake P.; Dulce Subida M.; Vale C.; de la Reguera D.F.; Blasco J., 2007. Benthos Sediment Quality Assessments In: Sustainable Management of Sediment Resources: Sediment Quality and Impact of Pollutants. Eds D. Barceló , M. Petrovic, Elsevier, 215-261. 
• dos Santos, A.; Santos, A.M.P.; Conway, D.V.P., 2007. Horizontal and vertical distribution of cirripede cyprid larvae in an upwelling system off the Portuguese coast. Marine Ecology Progress Series, 329: 145-155. (IF = 2.286)
• Durmaz, Y.; Monteiro, M.; Bandarra, N. M.; Gokpinar S.; Isik,O., 2007. The effect of low temperature on fatty acid composition and tocopherols of red microalga, Porphyridium cruentum Journal of Applied Phycology 19: 223-227.
• Durmaz, Y.; Monteiro, M.; Koru, E.; Bandarra, N. M, 2007. Concentration of sterols of biomass of Porphyridium cruentum at stationary phase. Pakistan Journal of Biological Science, 10(7): 1144-1146.
• Echevarría, F.; Acuña, J. L.; Hernández León, S.; Saiz, E.; Santos, A. M. P.; Barange, M., Eds., 2007. Ecological functioning of the Iberian seas: A synthesis of GLOBEC research in Spain and Portugal. Progress in Oceanography, 74(2-3): 95-97. (IF = 2.264)
• Falcão, M.; Santos, M.N.; Vicente, M.; Monteiro, C. C., 2007. Biogeochemical processes and nutrient cycling within an artificial reef off Southern Portugal. Marine Environmental Research 63 (2007) 429–444
• Falcão, M.; Santos, M.N.; Vicente, M.; Monteiro, C.C., 2007. Biogeochemical processes and nutrient cycling within an artificial reef off southern Portugal. Marine Environmental Research, 63: 429-444. 
• Fernández-Tajes, J.; Gaspar, M.; Martínez-Patiño, D.; McDonough, N.; Roberts, D.; González-Tizón, A.; Martínez-Lage, A.; Méndez, J., 2007. Genetic variation of the razor clam Ensis siliqua (Jeffreys, 1875) along the European coast based on random amplified polymorphic DNA markers Aquaculture Research, 38 (11): 1205-1212
• Ferreira J.G.; Vale C.; Soares V.; Salas F.; Stacey P.E.; Bricker S.B.; Silva M.C.; Marques J.C., 2007. Monitoring of coastal and transional waters under the E.U. Water Framework Directive. Environmental Monitoring and Assessment 135: 195-216.
• Figueiredo, I.; Moura, T.; Gordo, L.S., 2007. Vertebrae counting?a way to resolve species identification of the genus Trachipterus (Osteichthyes: Trachipteridae). Journal of the Marine Biological Association of the United Kingdom - Biodiversity Records, 5719.
• Figueiredo, I.; Moura, T.; Neves, A.; Machado, P.B.; Rosa, C.; Gordo, L.S., 2007. Evidence for temporal changes in ray population in the Portuguese coast ? its implications in the ecosystem. Aquatic Living Resources, 20 (1): 85-94.
• Fonseca, P.; Campos, A.; Millar, R., 2007. Codend selection in the deep-water crustacean trawl fishery in Portuguese southern waters. Fish. Res. 85:49-60.
• Ganias, K.; Nunes, C.; Stratoudakis, Y., 2007. Degeneration of sardine (Sardina pilchardus) post-ovulatory follicles: structural changes and factors affecting resorption. Fish Bull 105: 131-139
• Garrido, S.; Marçalo, A.; Zwolinski, J.; van der Lingen, C., 2007. Laboratory investigations on the effect of prey size and concentration on the feeding behaviour of Sardina pilchardus. Mar Ecol Prog Ser 330: 189-199
• Garrido, S.; Rosa, R.; Ben-Hamadou, R.; Cunha, M.E.; Chícharo, M.A.; van der Lingen, C.D., 2007. Effect of maternal fat reserves on the fatty acid composition of sardine (Sardina pilchardus) oocytes. Comp. Biochem. Physiol. B Biochem. Mol. Biol. 148(4):398-409
• Gaudêncio, M.J.; Cabral, H.N., 2007. Trophic structure of macrobenthos in the Tagus estuary and adjacent coastal shelf. Hydrobiologia, 587: 241-251.
• Gonçalves, A C.; Antas, S.E.; Nunes, M.L., 2007. Freshness and quality criteria of iced farmed Senegalese sole (Solea senegalensis). J. Agric. Food Chem., 55: 3452-3461 (URL: http://dx.doi.org/10.1021/jf0632942).
• Hampel M.; Gonzalez-Maco E.; Vale C.; Blasco J., 2007. Derivation of predicted no effect concentrations (PNEC) for marine environment risk assessment: Application of differnt approaches to the model contaminant Linear Alkylbenzene Sulphonates (LAS) in a site-specific environment. Environmental International, 33, 4, 486-491.
• Ibaibarriaga, L.; Irigoien, X.; Santos, M.; Motos, L.; Fives, J.M.; Franco, C.; Lago de Lanzós, A.; Acevedo, S.; Bernal, M.; Bez, N.; Eltink, G.; Farinha, A.; Hammer,C.; Iversen, A.; Milligan, S.P.; Reid, D.G., 2007. Egg and larval distribution of seven fish species in north-east Atlantic waters. Fish. Oceanogr. 16:3, 284-293
• Jørgensen,C.; Enberg, K.; Dunlop, E. S.; Arlinghaus, R.; Boukal, D. S.; Brander, K.; Ernande, B.; Gårdmark, A.; Johnston, F.; Matsumura, S.; Pardoe, H.; Raab, K.; Silva, A.; Vainikka, A.; Dieckmann, U.; Heino, M.; Rijnsdorp, A., 2007. Management of the world's evolving fish stocks. Science, 318, 1247-1248.
• Karaiskou, N.; Triantafyllidis, A.; Alvarez, P.; Lopes, P.; Garcia-Vazquez, E.; Triantafyllidis, C., 2007. Horse mackerel egg identification using DNA methodology. Marine Ecology, 28: 429-434.
• Kent, M.; Knöchel, R.; Daschner, F.; Schimmer, O.; Oehlenschläger, J.; Mierke-Klemeyer, S.; Kroeger, M., Barr, U.-K.; Floberg, P.; Tejada, M.; Huidobro, A.; Nunes, L.; Martins, A.; Batista, I.; Cardoso, C., 2007. Intangible but not intractable: the prediction of fish ‘quality’ variables using dielectric spectroscopy. Meas. Sci. Technol., 18, 1029-1037.
• Knowles, T.G.; Brown, S.N.; Warriss, P.D.; Lines, J.; Tinarwo, A.; Bravo, A.; Carvalho, H.; Gonçalves, A., 2007. Effect of electrical stunning at slaughter on the carcass, flesh and eating quality of farmed sea bass (Dicentrarchus labrax). Aquaculture Research, 38: 1732-1741.
• Laurent, V.; Caneco, B.; Magoulas, A.; Planes, S., 2007. Isolation by distance and selection effects on genetic structure of sardines Sardina pilchardus Wlabaum. Journal of Fish Biology 71 (suppl. A): 1-17
• Leitão, A.; Chaves, R.; Santos, R.; Guedes-Pinto, H.; Boudry, P., 2007. Interspecific hybridization in oysters: Restriction Enzyme Digestion Chromosome Banding confirms Crassostrea angulata × Crassostrea gigas F1 hybrids. Journal of Experimental Marine Biology and Ecology, 343: 253-260.
• Leitão, F.; Santos, M.N.; Monteiro, C.C., 2007. Contribution of artificial reefs to the diet of the white sea-bream, Diplodus sargus (Linnaeus, 1758). ICES Journal of Marine Science, 64 (3): 473-478.
• Leitão, F.M.S.; Gaspar, M.B., 2007. Immediate effect of intertidal non-mechanised cockle harvesting on macrobenthic communities: a comparative study. Scientia Marina, 71(4): 723-733
• Lopes C. B.; Pereira M. E.;Vale C.; Lillibo A.I.; Pardal M. A.; Duarte A.C.,2007. Assessment of sparial environmental quality status in Ria de Aveiro (Portugal). Scientia Marina 71, 2. 
• Lopes C.B.; Lillebo A.I.; Dias J.M.; Pereira E.; Vale C.; Duarte A.C., 2007. Nutrient dynamics and seasonal succession of phytoplankton in a southern European Estuary: Ria de Aveiro, Portugal. Estuarine Coastal Shelf Science, 71, 3-4, 480-490. 
• Manso, M.; Carvalho, M. L.; Nunes, M. L., 2007. Characterization of essential and toxic elements in cephalopod tissues by EDXRF and AAS. X-Ray Spectrom. 36: 413– 418. (URL: http://dx.doi.org/ 10.1002/xrs.996).
• Martins, M.; Ferreira, A.M.; Vale, C.,.2007. The influence of Sarcorconia fruticosa on retention of PAHs in salt marsh sediments (Sado estuary, Portugal). Chemosphere (2007) doi:10.1016/j.chemosphere.2007.10.054.
• Mattiucci, S.; Abaunza, P.; Damiano, S.; Garcia, A.; Santos, M. N.; Nascetti, G., 2007. Distribution of Anisakis larvae, identified by genetic markers, and their use for stock characterization of demersal and pelagic fish from European waters: an update. Journal of Helminthology, 81 (2): 117-127.
• Mierke-Klemeyer, S.; Larsen, R.; Oehlenschläger, J.; Maehre, H.; Elvevoll, E. O.; Bandarra, N. M.; Parreira, R.; Andrade, A. M.; Nunes, M.L.; Schram, E.; Luten, J., 2007. Retention of health related beneficial components during household preparation of selenium-enriched African Catfish (Clarias gariepinus) fillets. European Food Research Technology DOI 10.1007/s00217-007-0793-7.
• Monterroso P.; Pato P.; Pereira E.; Millward G.E.; Vale C.; Duarte A., 2007. Metal-contaminated sediments in a semi-closed basin: implications for recovery. Estuarine Coastal and Shelf Science 71, 148-158.
• Morales-Caselles, C.; Kalman, J.; Micaelo, A.C.; Ferreira, A.M.; Vale, C.; Riba, I.; DelValls, T.A., 2007. Sediment contamination, bioavailability and toxicity of sediments affected by an accute oil spill. Four years after the sinking of the Tanker Prestige (2002). Chemosphere (2008), doi10.1016/j.chemosphere.2007.12.013.
• Moreno, A.; Azevedo, M.; Pereira, J.; Pierce, G.J., 2007. Growth strategies in the squid Loligo vulgaris from Portuguese waters. Marine Biology Research 3: 49-59.
• Moura, A.; Boaventura, D.; Cúrdia, J.; Carvalho, S.; Cancela Da Fonseca, L.; Leitão, F.; Santos, M.N.; Monteiro, C.C., 2007. Effect of depth on macrobenthic colonization of the Algarve artificial reefs (southern Portugal). Hydrobiologia, 580: 173-180.
• Moura, T.; Figueiredo, I.; Farias, I., Serra-Pereira, B.; Coelho, R.; Erzini, K.; Neves, A.; Gordo, L.S., 2007. The use of caudal thorns for ageing Raja undulata from the Portuguese continental shelf in relation with its reproductive cycle. Marine and Freswater Research, 58 (11): 983-992.
• Neves, A.; Figueiredo, I.; Moura, T.; Assis, C.; Gordo, L. S., 2007. Diet and feeding strategy of Galeus melastomus in the continental slope off southern Portugal. Vie et Milieu - Life and environment, 57 (3): 165-169.
• O’Driscoll, N.; Poissant, L.; Canário, J.; Ridal, J.; Lean, D.R.S., 2007. Continuous analysis of dissolved gaseous mercury and mercury volatilization in the Upper St. Lawrence River: Exploring temporal relationships and UV attenuation. Environ. Sci. Technol., 41, 15, 5342-5348. 
• Oliveira, M.R.; Erzini, K., 2007. An assessment of the impacts and implications of recreational shore angling in the north of Portugal. Fisheries Management and Ecology. 14:343-352.
• Parra, M. D.; Bandarra, N.M.; Thorsdottir, I.; Kiely, M.; Martínez, J.A, 2007. Impact of fish and omega-3 fatty acids on oxidative stress when included into a moderate energy-restricted program to treat. European Journal of Nutrition, 46(8):460-467..
• Pedro, S.; Nunes, M. L., 2007. Reducing salt in seafood products. Eds. Kilcast, D.; Angus, F. In Reducing salt in foods – practical strategies. Woodhead Publishing Limited, Cambridge, 256-282.
• Pereira, P.; Caçador, I.; Vale, C.; Caetano, M.;. Costa, A., 2007. Decomposition of belowground biomass litter and metal dynamics in salt marshes (Tagus Portugal). Science Total Environment 380:93-101.
• Picado A.; Bebianno M.J.; Costa M.H.; Ferreira A.; Vale C., 2007. Biomarkers: a strategic tool in the assessment of environmental quality of coastal waters. Hydrobiologia 587: 79-87.
• Picado, A.; Bebiano, M.J.; Ferreira, A.M.; Vale, C., 2007. Towards an integrated knowledge and management of estuarine systems. Hydrobiologia, 587, 79-87. 
• Poissant, L.; Constant, P.; Pilote, M.; Canário, J.; O’Driscoll, N.; Ridal, J.; Lean, D., 2007. The ebullition of hydrogen, carbon monoxide, methane, carbon dioxide and total gaseous mercury from the Cornwall Area of Concern. Sci. Total Environ., 381, 1-3, 256-262.
• Pousão-Ferreira, P. 2007. Cultivo larvar de linguado (Solea senegalensis). In “Manual de Cultivo de Linguado e outros Peixes Planos” (Junta da Andalucia. IFAPA), IV, pp. 41-54. Junta Andalucia, Sevilha.
• Queiroga, H.; Cruz, T.; dos Santos, A.; Dubert, J.; Gonzaléz-Gordillo, J. I.; Paula J., Peliz, Á.; Santos, A.M.P., 2007. Oceanographic and behavioural processes affecting invertebrate larval dispersal and supply in the western Iberia upwelling ecosystem. Progress in Oceanography, 74(2-3) 174-191. (IF = 2.264)
• Ramos, J.; Santos, M.N.; Whitmarsh, D.; Monteiro, C.C., 2007. Stakeholder perceptions regarding the environmental and socio-economic impacts of the Algarve artificial reefs. Hydrobiologia, 580: 181-191.
• Relvas, P.; Barton, E.D.; Dubert, J.;. Oliveira, P. B.; Peliz, A.; da Silva, J.C.B.; Santos, A.M.P., 2007. Physical Oceanography of the Western Iberia Ecosystem: latest views and challenges. Progress in Oceanography, 74(2-3) 149-173(IF = 2.264)
• Rosa, R.; Bandarra, N. M.; Nunes, M. L., 2007. Nutritional quality of African catfish Clarias gariepinus (Burchell 1822): a positive criterion for the future development of the European production of Siluroidei. International Journal of Food Science and Technology, 42: 342-351.
• Sá, R.; Pousão-Ferreira, P.; Oliva-Teles, A., 2007. Growth performance and metabolic utilization of diets with different protein:carbohydrate ratios by white sea bream (Diplodus sargus, L.) juveniles. Aquaculture Research, 38(3): 100-105.
• Saavedra, M.; Beltran, M.; Pousão-Ferreira, P.; Dinis, M.T.; Blasco, J.; Conceição, L.E.C., 2007. Evaluation of bioavailability of individual amino acids in Diplodus puntazzo larvae: Towards the ideal dietary amino acid profile. Aquaculture, 263: 192-198.
• Santos, A.M.P.; Chícharo A.; dos Santos A.; Moita, T.; Oliveira, P.B.; Peliz Á.; Ré, P., 2007. Physical-biological interactions in the life history of small pelagic fish in the Western Iberia Upwelling Ecosystem. Progress in Oceanography, 74(2-3): 192-209.
• Santos, M.N.; Monteiro, C.C., 2007. A fourteen-year overview of the fish assemblages and yield of the two oldest Algarve artificial reefs (southern Portugal). Hydrobiologia, 580: 225-231.
• Serpa, D.; Falcão, M.; Duarte, P.; Cancela da Fonseca, L.; Vale, C., 2007. Evaluation of the ammonium and phosphate release from intertidal and subtidal sediments of a shallow coastal lagoon (Ria formosa - Portugal): a modelling approach. Biogeochemistry, 82:291-304.
• Serpa, D.; Falcão, M.; Duarte, P.; Cancela da Fonseca, L.; Vale, C., 2007. Evaluation of ammonium and phosphate release from intertidal and subtidal sediments of a shallow coastal lagoon (Ria Formosa - Portugal): a modeling approach. Biogeochemistry, 82: 291-304.
• Serpa, D.; Falcão, M.; Pousao-Ferreira, P.; Vicente, M.; Carvalho, S., 2007., Geochemical changes in white seabream (Diplodus sargus) earth ponds during a production cycle. Aquaculture Research, 38(15), 1619-1626
• Sobrinho-Gonçalves, L.; Moita, M.T., 2007. Copepod grazing on a Dinophysis acuta thin-layer bloom”. ISSHA. Proceedings of the 12th International Conference on HABs. 11-12
• Sousa, R.; Freire, R.; Rufino, M.; Mendez, J.; Gaspar, M.; Antunes, C.; Guilhermino, L., 2007. Genetic and shell morphological variability of the invasive bivalve Corbicula fluminea (Muller, 1774) in two Portuguese estuaries. Estuarine, Coastal and Shelf Science, 74: 166-174
• Stehle, M.; dos Santos, A.; Queiroga, H., 2007. Comparison of zooplankton sampling performance of Longhurst-Hardy Plankton Recorder and Bongo nets. Journal of Plankton Research, 29 (2): 169-177, doi: 10.1093/plankt/fbm004.
• Stratoudakis, Y.; Coombs, S.; Lago de Lanzós, A.; Halliday, N.: Costas, G.; Caneco, B.; Franco, C.; Conway, D.; Santos, M.B.; Silva, A.; Bernal, M., 2007. Sardine (Sardina pilchardus) spawning seasonality in European waters of the Northeast Atlantic. Mar Biol 152: 201-212
• Taris, N., Batista, F. M., Boudry, P. 2007. Evidence of a response to unintentional selection for faster development associated with inbreeding depression in Crassostrea gigas. Aquaculture 272 (S1): S69–S79.
• Thorsdottir, I.; Tomasson, H.; Gunnarsdottir, I.; Gisladottir, E.; Kiely, M.; Parra, L.; Bandarra, N. M., Shaafsma, G.; Martinéz, J. A., 2007. Randomized trial of weight-loss-diets for young adults varying in fish and fish oil content. International Journal of Obesity: 31: 1560–1566; doi: 0.1038/sj.ijo.0803643.
• Vale, P., 2007. Chemistry of diarrhetic shellfish poisoning toxins. In: Botana, L. and Hui, Y.H. (eds.), Phycotoxins: Chemistry and Biochemistry, Blackwell Publishing, Ames-Iowa, USA, pp. 211-221.
• Valente, L. M. P.; Bandarra, N. M.; Figueiredo-Silva, A. C.; Cordeiro, A. R.; Simões, R. M.; Nunes, M. L., 2007. Influence of conjugated linoleic acid on growth, lipid composition and hepatic lipogenesis in juvenile European sea bass (Dicentrarchus labrax). Aquaculture 267: 225-235.
• Valente, L. M. P.; Bandarra, N. M.; Figueiredo-Silva, A. C.; Rema, P.; Vaz-Pires, P.; Martins, S.;  Prates, J. A. M.; Nunes, M. L., 2007. Conjugated linoleic acid in diets for large size rainbow trout (Oncorhynchus mykiss): effects on growth, chemical composition and sensory attributes. British Journal of Nutrition 97: 289-297.
• Vasconcelos, P.; Cúrdia, J.; Castro, M.; Gaspar, M. B., 2007. The shell of Hexaplex (Trunculariopsis) trunculus (Gastropoda: Muricidae) as a mobile hard substratum for polychaetes (Annelida: Polychaeta) in the Ria Formosa (Algarve coast - southern Portugal). Hydrobiologia, 575: 161-172.
• Wise, L.; Silva, A.; Ferreira, M.; Silva, M.A.; Sequeira, M., 2007 Interactions between small cetaceans and the purse-seine fishery in western Portuguese waters. Sci Mar 71(2): 405-412
• Zuo, J.; Du, L.; Peliz, A.; Santos, A. M. P.; Yu, Y., 2007. The characteristics of near-surface velocity during the upwelling season on the northern Portugal shelf. Journal of Ocean University of China, 6(3): 213-225
• Zwolinski, J.; Morais, A.; Marques, V.; Stratoudakis, Y.; Fernandes, P., 2007. Diel variation in the vertical distribution and schooling behaviour of sardine (Sardina pilchardus) off Portugal. ICES J Mar Sci 64: 963-972

2006

• Afonso, C.; Lourenço, H.; Martins, M. F.; Nunes, M. L., 2006. Contaminant metals in cod products. J. B. Luten, C. Jacobsen, K. Bekaert, A. Saebø, J. Oehlenschläger (Eds.). In Seafood research from fish to dish. Quality, safety and processing of wild and farmed fish, Wageningen Academic Publishers, The Netherlands, p. 503-506.
• Amado, J., Antunes, P., Gil, O., Vale, C. 2006. Mobility of organochlorines in muscle of sardine (Sardina pilchardus) during spawning (Portuguese coast). Ciencias Marinas, 32 (2B): 369-377.
• Azevedo, M. 2006. Bayesian estimation of the key parameters of a fish population. In Bayesian Statistics and its Applications, ed. S.K. Upadhyay, U. Singh and D.K. Dey. Anamaya Publishers, New Delhi, India: 17-35.
• Bandarra, N. M.; Nunes, M. L.; Prates, J. A. M.; Andrade, A. M.; Pereira, S.; Monteiro, M.; Rema, P.; Valente, L. M. P., 2006. Effect of dietary conjugated linoleic acids on muscle, liver and visceral lipid deposition in rainbow trout juveniles (Oncorhynchus mykiss). Aquaculture 254: 496-505.
• Batista, I.; Pires, C.; Nelhas, R.; Godinho, V., 2006. Acid and alkaline-aided protein recovery from Cape hake by-products. J. B. Luten, C. Jacobsen, K. Bekaert, A, Sæbø, J. Oehlenschläger (Eds.). In Seafood research from fish to dish. Quality, safety and processing of wild and farmed fish. Wageningen Academic Publishers, p. 427-437.
• Boaventura, D.; Moura, A.; Leitão, F.; Carvalho, S.; Cúrdia, J.; Pereira, P.; Cancela Da Fonseca, L.; Santos, M.N.; Monteiro, C.C., 2006. Macrobenthic colonisation of artificial reefs on the southern coast of Portugal (Ancão, Algarve). Hydrobiologia, 555: 335-343.
• Bordalo-Machado, P., 2006. Fishing Effort Analysis and Its Potential to Evaluate Stock Size. Reviews in Fisheries Science, 14:369–393.
• Branco, V., dos Santos, M..N., Garcia, A. e Vale, C. 2006. Mercury and lead in the muscle of Atlantic Swordfish Xiphias gladius L., 1758): a tool for stock delimitation. ICCAT - Collective Volumes of Scientific Papers, SCRS/06/032.
• Brogueira, M.J., Cabeçadas, G. 2006. Identification of similar environmental areas in Tagus estuary by using multivariate analysis. Ecological Indicators, 6(3): 508-515. (http://dx.doi:10.1016/j.ecolind.2005.07.001)
• Caetano, M., C. Vale e M. Falcão, 2006. Particulate metal distribution in Guadiana estuary punctuated by flood episodes. Estuarine Coastal Shelf Science 70:109-106. 
• Caetano, M., N. Fonseca, R. Cesário e C. Vale. Mobility of Pb in salt marshes recorded by total content and stable isotopic signature. Science Total Environment (in press).
• Calado, R.; Nogueira, N.; dos Santos, A. 2006. Extended parental care in a hermit crab of the genus Calcinus (Anomura: Diogenidae). Journal of the Marine Biological Association of the United Kingdom, 86, 121-123.
• Canário, J, M. Caetano e C. Vale, 2006. Validation and application of an analytical method for monomethylmercury quantification in aquatic plant tissues. Analytica Chimica Acta 580:268-262.
• Cardoso, C.; Mendes, R.; Nunes, M. L., 2006. Effect of transglutaminase and carrageenan on restructured fish products containing dietary fibres. International Journal of Food Science and Technology, 41: 1–9.
• Carrera P, Churnside CH, Boyra G, Marques V, Scalabrin C, Uriarte A (2006) Comparison of airborne lidar with echo-sounders: a case study from the coastal Atlantic waters of southern Europe. ICES J Mar Sci 63: 1736-1750.
• Carvalho, S., Gaspar, M., Moura, A., Vale, C., Antunes, P., Gil, O., Cancela da Fonseca, L., Falcão, M. 2006. The use of the marine biotic index AMBI in the assessment of the ecological status of the Óbidos lagoon (Portugal). Marine Pollution Bulletin, 52(11): 1414-1424.
• Carvalho, S.; Barata,M.; Pereira,F.; Gaspar,M.B.; Cancela da Fonseca, L.; Pousão-Ferreira, P., 2006. Distribution patterns of macrobenthic species in relation to organic enrichment within aquaculture earthen ponds. Marine Pollution Bulletin, 52: 1573–1584.
• Carvalho, S.; Moura, A.; Sprung, M., 2006. Ecological implications of removing seagrass beds (Zostera noltii) for bivalve aquaculture in southern Portugal. Cahiers de Biologie Marine, 47 (3): 321-329.
• Carvalho,S., Barata,M.; Pereira,F.; Gaspar,M.B.; Cancela da Fonseca, L.; Pousão-Ferreira, P., 2006. Distribution patterns of macrobenthic species in relation to organic enrichment within aquaculture earthen ponds. Marine Pollution Bulletin, 52: 1573–1584.
• Castelo Branco, M. A. Moura, O.; Gamito S.2006. Growth and survival of post-larvae of sole (Solea senegalensis) in net cages at the bottom of earthen ponds • Aquaculture, Volume 259, Issues 1-4, 8 September 2006, Pages 278-282
• Cecílio, P.; Raimundo, J.; Canário, J.; Vale, C.; Sequeira, M., 2006. Relationships between total and organic mercury concentrations in tissues and length of common dolphins (Delphinus delphis) from the portuguese coast. Ciencias Marinas, 32(2A): 379-387.
• Chen, C.S.; Pierce, G.J.; Wang, J.; Robin, J.-P.; Poulard, J.C.; Pereira, J.; Zuur, A.F.; Boyle, P.R.; Bailey, N.; Beare, D.J.; Jereb, P.; Ragonese, S.; Mannini, A.; Orsi-Relini, L., 2006. The apparent disappearance of Loligo forbesi from the south of its range in the 1990s: Trends in Loligo spp. abundance in the northeast Atlantic and possible environmental influences, Fisheries Research, 78(1): 44-54.
• Coombs SH, Smyth TJ, Conway DVP, Halliday NC, Bernal M, Stratoudakis Y, Alvarez P (2006) Spawning season and temperature relationships for sardine (Sardina pilchardus) in the eastern North Atlantic. J Mar Biol Ass 86: 1245-1252.
• F. Naughton, M.F. Sanchez Goñi, S. Desprat, J.-L. Turon, J. Duprat, B. Malaizé, C. Joli, E. Cortijo, T. Drago, M.C. Freitas (2006) - Present-day and past (last 25000 years) marine pollen signal off western Iberia. Marine Micropaleontology, MarMic-01115, 24 pages 
• Falcão, M., M. Caetano, D. Serpa, M. Gaspar e C. Vale, 2006. Effects of infauna harvesting on tidal flats of a coastal lagoon (Ria Formosa-Portugal): implications on phosphorus dynamics. Marine Environmental Research 60(2):136-148.
• Farias, I., Figueiredo,I., Moura, T., Gordo, L.S., Neves, A. & Serra-Pereira, B., 2006. Diet comparison of four ray species ( Raja clavata, Raja brachyura, Raja montagui and Leucoraja naevus) caught along the Portuguese continental shelf. Aquat. Living Resour. 19, 105–114.
• Fidalgo e Costa, P., Gil, J., Passos, A.M., Pereira, P., Melo, P., Batista, F., Cancela da Fonseca, L. 2006. The market features of imported non-indigenous polychaetes in Portugal and consequent ecological concerns. Scientia Marina 70S3: 287-292.
• Garcia-Vazquez, E.; Alvarez, P.,; Lopes, P.; Karaiskou, N.; Perez, J.; Teia, A.; Martinez, J. L.; Gomes, L.; Triantafyllidis, C., 2006. PCR-SSCP of the 16S rRNA gene, a simple methodology for species identification of fish eggs and larvae. Sciencia Marina, 70, S2: 13-21.
• Gonçalves, S.; Lourenço, H.; Afonso, C.; Martins, M. F.; Nunes, M. L., 2006. Characterization of the quality of frozen sea products commercialized in Portugal. J. B. Luten, C. Jacobsen, K. Bekaert, A. Saebø, J. Oehlenschläger (Eds.). In Seafood research from fish to dish. Quality, safety and processing of wild and farmed fish. Wageningen Academic Publishers, The Netherlands, p. 283-288.
• Guerao, G.; Abelló, P.; dos Santos, A. 2006. Morphological variability of the megalopa of Liocarcinus depurator (Brachyura: Portunidae) in Mediterranean and Atlantic populations. Journal of Natural History, 40, 1851-1866.
• J. Moreno, F. Fatela , C. Andrade and T. Drago (2006) Distribution of “living” Pseudothurammina limnetis (Scott and Medioli): an occurence on the brackish tidal marsh of Minho/Coura estuary– Northern Portugal. Révue de Micropaléontologie, 49: 45-53.
• Lapègue, S., Ben Salah, I., Batista, F. M., Heurtebise, S., Neifar, L., Boudry, P. 2006. Phylogeographic study of theProvence oyster, Ostreola stentina (Payradeau, 1826), populations from Morocco, Portugal and Tunisia: evidence of a geographic disjunction with the closely related species, Ostrea aupouria and Ostreola equestris. Marine Biology 150: 103-110.
• Leitão A., Chaves R., Matias D., Joaquim, S, Ruano, F. and Guedes-Pinto H., 2006. Restriction enzyme digestion chromosome banding on two commercially important veneroid bivalve species: Ruditapes decussatus and Cerastoderma edule. Journal of Shellfish Research, 25 (3), 857-864.
• Lourenço, H.; Lima, C.; Oliveira, A.; Gonçalves, S.; Afonso, C.; Martins, M. F.; Nunes, M. L., 2006. Concentrations of mercury, lead and cadmium in bivalves from the Portuguese coast. J. B. Luten, C. Jacobsen, K. Bekaert, A. Saebø, J. Oehlenschläger (Eds.). In Seafood research from fish to dish. Quality, safety and processing of wild and farmed fish. Wageningen Academic Publishers, The Netherlands, p. 497-502.
• Lourenço, Sílvia e Pereira, João. 2006. Estimating standardised landings per unit effort for an octopus mixed components fishery, Fisheries Research, 78(1): 89-95
• Marçalo A, Mateus L, Duarte Correia JH, Serra P, Fryer R, Stratoudakis Y (2006) Sardine (Sardina pilchardus) stress reactions to purse seine fishing. Mar Biol 149: 1509-1518.
• Marques, A.; Dhont, J.; Sorgeloos, P.; Bossier, P., 2006. Immunostimulatory nature of -glucans and baker’s yeast in a gnotobiotic Artemia challenge tests. Fish & Shellfish Immunology. 20 (5): 682-692.
• Marques, A.; Ollevier, F.; Verstraete, W.; Sorgeloos, P.; Bossier, P.,. 2006. Gnotobiotically grown-aquatic animals: opportunities to investigate host-microbe interactions. Review. Journal of Applied Microbiology. 100 (5): 903-918.
• Marques, A.; Thanh, T. H.; Sorgeloos, P.; Bossier, P., 2006. Use of microalgae and bacteria to enhance protection of gnotobiotic Artemia against different pathogens. Aquaculture. 258 (1-4): 116-126.
• Marques, A.; Thanh, T. H.; Verstraete, W.; Dhont, J.; Sorgeloos, P.; Bossier, P., 2006. Use of selected bacteria and yeast to protect gnotobiotic Artemia against different pathogens. Journal of Experimental Marine Biology and Ecology. 334 (1): 20-30.
• Moita, M.T., Sobrinho-Gonçalves, L., Oliveira, P.B., Palma, S. and Falcão, M., 2006. A Bloom of Dinophysis acuta in a thin layer off NW Portugal. African Journal of Marine Science 28(2): 265-269.
• Moura, A.; Boaventura, D.; Cúrdia, J.; Santos, M.N.; Monteiro, C.C., 2006. Effect of depth on the macrobenthic communities’ biomass of the Algarve AR (southern Portugal). Bulletin of Marine Science, 78 (1): 83-92.
• Nunes, M. L.; Bandarra, N. M.; Oliveira, L.; Batista, I.; Calhau, M. A., 2006. Composition and nutritional value of fishery products consumed in Portugal. J. B. Luten, C. Jacobsen, K. Bekaert, A, Sæbø, J. Oehlenschläger (Eds.). In Seafood research from fish to dish. Quality, safety and processing of wild and farmed fish. Wageningen Academic Publishers, p. 477-487.
• Oliveira, A.P., Nogueira, M., Cabeçadas, G., 2006. CO2 variations in surface adjacent coastal waters to Tagus Estuary (Portugal). Ciencias Marinas, 32(2B): 401-411.
• Ortiz Delgado, J.B.; Ruane, N.M.; Pousão-Ferreira, P.; Dinis, M.T.; Sarasquete, C., 2006. Thyroid gland development in Senegalese sole (Solea senegalensis Kaup 1858) during early life stages: A histochemical and immunohistochemical approach. Aquaculture, 260: 346-356.
• Ortiz Delgado, JB,; Ruane, N.M.; Pousão-Ferreira, P.; Dinis, M.T. & Sarasquete, C., 2006. Thyroid gland development in Senegalese sole (Solea senegalensis Kaup 1858) during early life stages: A histochemical and immunohistochemical approach. Aquaculture, 260: 346-356.
• Ozorio, R.O.A.; Valente, L.M.P.; Pousao-Ferreira, P. Oliva-Teles, A., 2006. Growth performance and body composition of white seabream (Diplodus sargus) juveniles fed diets with different protein and lipid levels. Aquaculture Research 37 (3): 255-263.
• Pedro, S.; Castro, S.; Santos, M.; Santos, A. T., 2006. Characterisation of Vibrio parahaemolyticus isolated from seafood products. J. B. Luten, C. Jacobsen, K. Bekaert, A, Sæbø, J. Oehlenschläger (Eds.). In Seafood research from fish to dish. Quality, safety and processing of wild and farmed fish. Wageningen Academic Publishers, p. 371-380.
• Pedro, S.; Costa, P.; Nunes, M. L., 2006. Sanitary Quality of Bivalves Marketed in Portugal. In Proceedings of 5th International Conference on Molluscan Shellfish Safety. Kathleen Henshilwood, Bryan Deegan, Terry McMahon, Caroline Cusack, Sinead Keaveney, Joe Silke, Micheál O’Cinneide, David Lyons and Philipp Hess (Eds). Galway, Ireland, p. 350-354.
• Pedro, S.; Fernandes, J.; Batista, I.; Nunes, M. L., 2006. Growth kinetic of Staphylococus aureus during cod (Gadus morhua) desalting. J. B. Luten, C. Jacobsen, K. Bekaert, A, Sæbø, J. Oehlenschläger (Eds.). In Seafood research from fish to dish. Quality, safety and processing of wild and farmed fish. Wageningen Academic Publishers, p. 359-364.
• Pereira da Fonseca, I; Ramos, P.; Ruano, F.; Duarte, A.; Costa, J.; Almeida, A.C.; Falcão, M.L.; Fazendeiro, M.I., 2006. Efficacy of Commercial Cleansing Procedures in Eliminating Cryptosporidium parvum Oocysts from Bivalves. J. Euk Microbiol., 53(s1): S49-S51.
• Pereira E., Abreu S.N., Coelho J.P., Lopes C.B., Pardal M.A., Vale C., Duarte A.C., 2006. Seasonal fluctuations of tissue mercury contents in the European shore crab Carcinus maenas from low and high contamination areas (Ria de Aveiro,Portugal). Marine Pollution Bulletin 52, 1450-1457.
• Pinto, A. L. Teixeira, P., Castilho,F., Felício, M. T., Pombal, F and GIBBS, P. A. Prevalence and serotyping of Listeria monocytogenes in Portuguese live bivalve molluscs sampled in various steps along the sanitary control process. Aquaculture Research 37 (11): 1112-1116.
• Ramalhosa E., Pato P., Monterroso P., Pereira E., Vale C., Duarte A.C., 2006. Accumulation versus remobilization of mercury in sediments of a contaminated lagoon. Marine Pollution Bulletin 52, 332-356. 
• Ramalhosa E., Segade S.R., Pereira E., Vale C., Duarte A., 2006. Mercury cycling between the water column and surface sediments in a contaminated area. Water Research, 40, 2893-2900.
• Ramos, J.; Santos, M.N.; Whitmarsh, D.; Monteiro, C.C., 2006. Patterns of use in an artificial reef system: a case study in Portugal. Bulletin of Marine Science, 78 (1): 203-211.
• Ramos, J.; Santos, M.N.; Whitmarsh, D.; Monteiro, C.C., 2006. The usefulness of the analytic hierarchy process to understand reef diving choices: a case study. Bulletin of Marine Science, 78 (1): 213-219.
• Rocio, R.; Gonçalves, A.; Cardoso, C.; Bandarra, N.; Nunes, M. L.; Ceulemans, S.; Couteau, P.; Rosa, I.; Pedroso, J.; Gonçalves, M.; Vieira, A.; Bitsakos, J.; Mourente, G., 2006. Aquality Project: Sea Bream, Sea Bass Quality Improved Through Feed Quality, Feed Management. Global Aquaculture Advocate, 9 (6): 56-58.
• Rosa, R., Pereira, J., Costa, P.R. e Nunes, M.L. 2006. Distribution, abundance, biology and biochemistry of the Stout bobtail squid Rossia macrosoma from the Portuguese coast, Marine Biology Research, 2: 14-23
• Rufino, M. M.; Gaspar, M. B.; Pereira, A. M.; Vasconcelos, P., 2006. Use of shape to distinguish Chamelea gallina and Chamelea striatula (Bivalvia: Veneridae): linear and geometric morphometric methods. Journal of Morphology, 267: 1433-1440.
• Sá, R.; Pousão-Ferreira, P.; Oliva-Teles, A., 2006. Effect of dietary protein and lipid levels on growth and feed utilization of white sea bream (Diplodus sargus) juveniles. Aquaculture Nutrition, 12: 310-321.
• Saavedra, M.; Conceição, L.E.C.; Pousão-Ferreira, P. & Dinis, M.T., 2006. Amino acid profiles of Diplodus sargus (L., 1758) larvae: Implications for feed formulation. Aquaculture, 261: 587-593.
• Saavedra, M.; Pousão-Ferreira, P., 2006. A preliminary study on the effect of lunar cycles on the spawning behaviour of the gilt-head sea bream, Sparus aurata. J. Mar. Biol. Ass. U.K. 86, 899-901.
• Santos, A. M. P., A. F. G. Fiúza & R. M. Laurs (2006). Influence of SST on catches of swordfish and tuna in the Portuguese domestic longline fishery. International Journal of Remote Sensing, 27(15): 3131-3152. 
• Santos, A. M. P., P. Ré, A. dos Santos & A. Peliz (2006). Vertical distribution of the European sardine (Sardina pilchardus) larvae and its implications for their survival. Journal of Plankton Research, 28(5): 523-532, doi:10.1093/plankt/fbi137 
• Santos, M.N.; Canas, A.; Lino, P.G.; Monteiro, C.C., 2006. Length–girth relationships for 30 marine fish species. Fisheries Research, 78(2-3): 368-373.
• Santos, M.N.; Lino, P.G.; Pousão-Ferreira, P. and Monteiro, C.C., 2006 Preliminary results of hatchery-reared seabreams released at artificial reefs off the Algarve coast (southern Portugal): a pilot study. Bulletin of Marine Science, 78(1): 77-84.
• Silva A, Santos MB, Caneco B, Pestana G, Porteiro C, Carrera P, Stratoudakis Y, 2006. Temporal and geographic variability of sardine maturity at length in the north-eastern Atlantic and the western Mediterranean. ICES J Mar Sci 63: 663-676.
• Silva, H.A.; Mendes, R.; Nunes, M. L.; Empis, J. M. A., 2006. Protein changes after irradiation and ice storage of Atlantic horse mackerel (Trachurus trachurus). European Food Research and Technology, 224 (1): 83-90.
• Sousa, P.; Azevedo, M.; Gomes, M.C., 2006. Species-richness patterns in space, depth, and time (1989-1999) of the Portuguese fauna sampled by bottom trawl. Aquatic Living Resources, 10 (2): 93-103. 
• Stratoudakis Y, Bernal M, Ganias K, Uriarte A., 2006. The daily egg production method: recent advances, current applications and future challenges. Fish Fish 7: 35-57.
• Taleb, H., Vale, P., Amanhir, R., Benhadouch, A., Sagou, R., Chafik, A., 2006. First detection of azaspiracids in North West Africa. Journal of Shellfish Research, 25 (3), 1067-1070.
• Vale, P., 2006. Detailed profiles of 7-O-acyl esters in plankton and shellfish from the Portuguese coast. J. Chromatogr. A, 1128, 181-188.
• Vale, P., 2006. Differential dynamics of dinophysistoxins and pectenotoxins, part II: offshore bivalve species. Toxicon, 47 (2), 163-173.
• Vale, P., Cerejo, M., Vilarinho, M.G., 2006. Toxin production by Dinophysis spp. at Ria de Aveiro, Portugal. In: Molluscan Shellfish Safety, Henshilwood et al. (Eds), The Marine Institute, Galway, Ireland, pp. 253-257.
• Vale, P., Gomes, S.S., Botelho, M.J., Rodrigues, S.M., 2006. Monitoring DSP toxins with immunoassay, LC-MS and mouse bioassay. In: Molluscan Shellfish Safety, Henshilwood et al. (Eds), The Marine Institute, Galway, Ireland, pp. 145-149.
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